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13 February 2026

Percutaneous Nephrolithotomy (PCNL): Treating Large Kidney Stones Effectively

Did you know that kidney stones larger than 2 centimetres cannot be effectively treated with shock wave therapy alone? Percutaneous nephrolithotomy (PCNL) is a minimally invasive surgical procedure designed to remove large or complex kidney stones that other treatment methods cannot adequately address. The procedure involves creating a small incision in the back to access the kidney directly, allowing surgeons to extract stones that would otherwise cause persistent pain, urinary obstruction, or kidney damage.

What Is PCNL?

Percutaneous nephrolithotomy is a surgical technique that creates direct access to the kidney through a small incision in the skin. The term “percutaneous” means through the skin, while “nephrolithotomy” refers to removing stones from the kidney. During the procedure, a urologist creates a narrow tract from the skin surface to the kidney’s collecting system, inserts specialised instruments through this channel, and fragments or removes the stones.

When Is PCNL Recommended?

PCNL is typically considered for:

  • Large kidney stones (greater than 2 cm in diameter)
  • Staghorn calculi (branching stones that fill the kidney’s collecting system)
  • Stones resistant to shock wave lithotripsy
  • Stones in the lower pole of the kidney
  • Complex stone burden involving multiple stones
  • Stones causing obstruction or recurrent infections

The PCNL Procedure

Pre-Operative Preparation

Before the procedure, you will undergo imaging studies such as CT scans or ultrasounds to map the exact location and size of the stones. Blood tests and urine cultures help identify any infections that require treatment before surgery. Your physician will review your medications, particularly blood thinners, which may need to be temporarily discontinued.

During Surgery

PCNL is performed under general anaesthesia. The patient is positioned face down on the operating table. The urologist performs the following steps:

  1. Creating Access: Using imaging guidance, the surgeon makes a small incision (approximately 1 cm) in the back and creates a tract to the kidney.
  2. Dilating the Tract: The opening is gradually widened to accommodate a nephroscope, a thin tube with a camera.
  3. Stone Fragmentation: Stones are broken into smaller pieces using ultrasonic, laser, or pneumatic energy.
  4. Stone Removal: Fragments are extracted through the access tract using specialised instruments.
  5. Placement of Drainage Tube: A nephrostomy tube is typically placed to drain urine and allow the kidney to heal.

The procedure generally takes 2-4 hours, depending on stone size and complexity.

Recovery and Post-Operative Care

Hospital Stay

Most patients remain hospitalised for 1-3 days following PCNL. The nephrostomy tube typically stays in place for 1-2 days, though complex cases may require longer drainage.

Managing Discomfort

Mild to moderate pain at the incision site is common. Prescription pain medications are provided, and discomfort typically improves significantly within the first few days.

Activity Restrictions

You should avoid heavy lifting (over 10 pounds) and strenuous physical activity for 2-4 weeks. Most patients can return to desk work within 1-2 weeks, though physically demanding jobs may require a more extended recovery period.

Follow-Up Care

A follow-up imaging study (usually a CT scan or ultrasound) is performed 2-4 weeks after surgery to confirm complete stone clearance. Residual fragments may require additional treatment.

Success Rates and Outcomes

PCNL is highly effective for the management of large and complex kidney stones. While the primary goal is to achieve complete stone clearance in a single session, the final outcome depends on the size, location, and composition of the stones. For particularly complex cases, such as staghorn calculi, the procedure aims to remove the majority of the stone burden, though the complexity of these cases may influence the overall clearance rate compared to simpler stones.

Potential Risks and Complications

As with any surgical intervention, PCNL carries potential risks. A balanced understanding of these complications is essential for informed patient consent:

  • Bleeding: This is a known risk during and after the procedure. While most cases are manageable, some patients may require additional clinical intervention to address significant blood loss.

  • Infection: Despite the use of preventative antibiotics, there is a risk of urinary tract infection or more serious systemic infection (sepsis), especially if the stones contain trapped bacteria.

  • Injury to Adjacent Structures: Due to the proximity of the kidneys to other organs, there is a rare possibility of injury to the colon, spleen, or liver during the creation of the access tract.

  • Residual Fragments: In some instances, small stone fragments may remain after the initial procedure, which may require monitoring or subsequent treatment.

  • Urine Leakage: Temporary leakage of urine from the incision site may occur, particularly if the drainage tubes are dislodged or removed before the tract has fully healed.

PCNL vs. Alternative Treatments

Shock Wave Lithotripsy (SWL)

SWL is non-invasive but less effective for large stones. Stone-free rates decrease significantly for stones over 2 cm. PCNL is preferred for large or complex stone burdens.

Ureteroscopy with Laser Lithotripsy

This approach accesses the kidney through the natural urinary tract. While less invasive than PCNL, it is time-consuming for large stones and may require multiple procedures.

Open Surgery

Rarely performed today, open nephrolithotomy involves a large incision and a longer recovery. It is reserved for highly complex cases where minimally invasive techniques are not feasible.

Prevention of Recurrent Kidney Stones

After successful stone removal, prevention becomes critical:

  • Adequate Hydration: Drink 2.5-3 litres of water daily to dilute urine and prevent stone formation.
  • Dietary Modifications: Limit sodium intake and reduce consumption of animal protein.
  • Stone Analysis: Chemical analysis of removed stones helps identify specific dietary restrictions.
  • Metabolic Evaluation: Blood and 24-hour urine collection tests identify metabolic abnormalities contributing to stone formation.
  • Medications: Depending on the stone type, medications such as thiazide diuretics, potassium citrate, or allopurinol may be prescribed.

Commonly Asked Questions

Is it normal to see blood in my urine after the procedure?

Yes, it is common to experience blood-tinged urine for several days to a couple of weeks as the kidney and ureter heal. However, if the bleeding becomes bright red, thick, or contains large clots, you should contact your urologist immediately for evaluation.

Will I have a permanent scar from the PCNL incision?

The incision used for PCNL is typically very small, measuring about 1cm in length. While a small mark may remain, it usually fades significantly over time and is much less noticeable than the scars resulting from traditional open surgery.

Can I undergo PCNL if I am currently taking blood-thinning medications?

Surgery generally cannot proceed while on active blood thinners due to the risk of bleeding; however, this does not disqualify you from the procedure. Your urologist will coordinate a plan to safely pause or “bridge” your medication a few days before the surgery.

What happens if I develop a fever once I return home?

A fever after PCNL can be a sign of a urinary tract infection or a more serious systemic infection. If your temperature rises above 38°C, you must seek medical attention urgently, as post-surgical infections require prompt antibiotic treatment.

Does having PCNL once mean I won’t get kidney stones again?

PCNL removes existing stones but does not change the underlying metabolic conditions that caused them. To prevent recurrence, it is essential to follow a personalised plan involving increased hydration, dietary adjustments, and sometimes medication based on your stone analysis.

Conclusion

PCNL provides effective treatment for large kidney stones with minimal invasiveness compared to traditional open surgery. The procedure achieves high stone-free rates and allows most patients to return to normal activities within 2–4 weeks. Understanding the technique, recovery process, and prevention strategies helps optimise outcomes and reduce the risk of recurrence.

If you are experiencing severe flank pain, recurrent urinary tract infections, or have been diagnosed with large kidney stones, schedule a consultation with Dr Azhari to determine the most appropriate treatment approach for your condition.

Dr. Nor Azhari Bin Mohd Zam

Dr. Nor Azhari Bin Mohd Zam

MBBS (NUS)|MRCS (Edin.)|MMed Surgery (NUS)|FAMS (Urology)

With more than 15 years experience as a certified Urologist, Dr Nor Azhari specializes in treating a wide range of kidney, bladder and prostate conditions as well as disorders of the male reproductive organs.

He offers minimally invasive treatment options and provides same-day appointments for convenience.

  • Skilled urologist and kidney stone surgeon.
  • Director of Endourology (Urinary stone service) at Singapore General Hospital – 2016 to 2023.
  • Recognized with the College of Surgeons Gold Medal and Singapore Urological Association Book prize.
  • Minimally invasive treatment options available (non-invasive and endoscopic/key-hole techniques).

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